SIMPREDICT (WORKING PAPER) Pleiotropy info TASK

Simpredict Tasks


Task 203: Minimal C-statistic required
Input the disease incidence and the test-positive threshold (based on PPV and SR) to obtain the minimal C-statistic required to identify such a group.
over 10 years


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At an incidence of 50 / 100,000 person-years, a meaningful subgroup (PPV > 5%; SR > 10%) can be identified when the model achieves a C-statistic of at least 0.81.

Search Detail SR: sensitivity rate; PPV: positive predictive value; TP: test positive rate

Risk threshold Minimal
(over 10 years) C-statistic SR PPV TP
1% 0.84 0.564 0.024 0.116 Best suboptimal match
2% 0.84 0.370 0.040 0.045 Best suboptimal match
3% 0.81 0.202 0.052 0.019 Good
4% 0.81 0.143 0.067 0.011 Good
5% 0.81 0.104 0.081 0.006 Good
6% 0.84 0.126 0.101 0.006 Good
7% 0.84 0.105 0.116 0.004 Good
8% 0.84 0.087 0.130 0.003 Best suboptimal match
9% 0.84 0.074 0.145 0.003 Best suboptimal match
10% 0.84 0.063 0.157 0.002 Best suboptimal match